STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_002357L-type lectin-like domain-containing protein. (486 aa)    
Predicted Functional Partners:
MCFD2
Multiple coagulation factor deficiency protein 2.
   
 0.952
CU097_003985
Uncharacterized protein.
   
 0.952
CU097_014964
Uncharacterized protein.
   
 0.952
SEC23
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.848
SEC22
SNAP receptor; Belongs to the synaptobrevin family.
   
 0.844
SAR1
COPII coat GTPase.
     
 0.838
ERV25
Vesicle coat component.
   
 0.830
BOS1
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
     
 0.823
SED5
Cis-Golgi t-SNARE syntaxin.
    
 0.816
GORASP2
Golgi reassembly-stacking protein 2.
    
 0.811
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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