STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_009413Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (64 aa)    
Predicted Functional Partners:
SBH1
Arf guanine nucleotide exchange factor sbh1.
   
 
 0.831
CU097_013010
TPR_REGION domain-containing protein.
    
 0.749
UBC6
Ubiquitin-conjugating enzyme E2 6.
     
 0.681
SED5
Cis-Golgi t-SNARE syntaxin.
     
 0.676
CU097_015721
V-SNARE coiled-coil homology domain-containing protein.
     
 0.648
CU097_003054
Uncharacterized protein.
    
 0.616
CU097_000290
Uncharacterized protein.
    
  0.616
SSN6_1
Glucose repression mediator protein.
    
  0.616
CU097_002493
TPR_REGION domain-containing protein.
    
  0.616
CU097_004530
Uncharacterized protein.
    
  0.616
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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