CU097_006846 protein (Rhizopus azygosporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CU097_006846

MaoC-like domain-containing protein. (314 aa)

Predicted Functional Partners:

SCP2

0.804

ECI2_1

0.780

ECI2_2

0.780

ECI2_3

0.780

ECI2_4

0.780

CU097_008862

0.777

PEX5

0.777

CU097_015074

0.777

POX1_2

0.775

CU097_003238

0.741

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU097_003238	CU097_006846	A0A367IMS4	A0A367JB62	SCP2 domain-containing protein.	MaoC-like domain-containing protein.	0.741
CU097_003238	CU097_008862	A0A367IMS4	A0A367JVT6	SCP2 domain-containing protein.	TPR_REGION domain-containing protein.	0.999
CU097_003238	CU097_015074	A0A367IMS4	A0A367KA56	SCP2 domain-containing protein.	TPR_REGION domain-containing protein.	0.999
CU097_003238	ECI2_1	A0A367IMS4	A0A367IMX5	SCP2 domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.982
CU097_003238	ECI2_2	A0A367IMS4	A0A367JRP9	SCP2 domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.982
CU097_003238	ECI2_3	A0A367IMS4	A0A367K0K8	SCP2 domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.982
CU097_003238	ECI2_4	A0A367IMS4	A0A367KEP5	SCP2 domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.982
CU097_003238	PEX5	A0A367IMS4	A0A367K9U4	SCP2 domain-containing protein.	Peroxisomal membrane signal receptor PTS1.	0.999
CU097_003238	POX1_2	A0A367IMS4	A0A367JLN4	SCP2 domain-containing protein.	Fatty-acyl coenzyme A oxidase.	0.922
CU097_003238	SCP2	A0A367IMS4	A0A367J706	SCP2 domain-containing protein.	Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.839
CU097_006846	CU097_003238	A0A367JB62	A0A367IMS4	MaoC-like domain-containing protein.	SCP2 domain-containing protein.	0.741
CU097_006846	CU097_008862	A0A367JB62	A0A367JVT6	MaoC-like domain-containing protein.	TPR_REGION domain-containing protein.	0.777
CU097_006846	CU097_015074	A0A367JB62	A0A367KA56	MaoC-like domain-containing protein.	TPR_REGION domain-containing protein.	0.777
CU097_006846	ECI2_1	A0A367JB62	A0A367IMX5	MaoC-like domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.780
CU097_006846	ECI2_2	A0A367JB62	A0A367JRP9	MaoC-like domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.780
CU097_006846	ECI2_3	A0A367JB62	A0A367K0K8	MaoC-like domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.780
CU097_006846	ECI2_4	A0A367JB62	A0A367KEP5	MaoC-like domain-containing protein.	Enoyl-CoA delta isomerase 2, mitochondrial.	0.780
CU097_006846	PEX5	A0A367JB62	A0A367K9U4	MaoC-like domain-containing protein.	Peroxisomal membrane signal receptor PTS1.	0.777
CU097_006846	POX1_2	A0A367JB62	A0A367JLN4	MaoC-like domain-containing protein.	Fatty-acyl coenzyme A oxidase.	0.775
CU097_006846	SCP2	A0A367JB62	A0A367J706	MaoC-like domain-containing protein.	Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.804