STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX6_1Peroxisomal assembly protein. (1076 aa)    
Predicted Functional Partners:
PEX1
Peroxisome biosynthesis protein pex1.
  
0.994
PEX14_1
Peroxisomal membrane protein pex14.
    
 0.941
PEX14_4
Peroxisomal membrane protein pex14.
    
 0.941
NPL4
Nuclear protein localization protein 4.
   
 0.906
CU097_008862
TPR_REGION domain-containing protein.
   
 0.891
PEX5
Peroxisomal membrane signal receptor PTS1.
   
 0.891
CU097_015074
TPR_REGION domain-containing protein.
   
 0.891
CU097_015702
UBX domain-containing protein.
    
 0.887
PEX10
Peroxisome bioproteinsis factor 10.
   
 0.883
CU097_001010
Uncharacterized protein.
    
 0.876
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.