STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_000136Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (636 aa)    
Predicted Functional Partners:
CU097_013424
Cytochrome b5 heme-binding domain-containing protein.
   
 0.868
CU097_005517
Uncharacterized protein.
   
 0.860
GDE1_1
Glycerophosphocholine phosphodiesterase.
     
 0.785
CU097_007115
Uncharacterized protein.
   
 0.785
GDE1_2
Glycerophosphocholine phosphodiesterase.
     
 0.785
CU097_002389
Uncharacterized protein.
   
 0.785
POX1_2
Fatty-acyl coenzyme A oxidase.
   
 0.771
CU097_011708
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.762
CAT2_1
Carnitine O-acetyltransferase mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
0.757
CU097_003579
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.756
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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