STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_008366Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
YSH1
Endoribonuclease ysh1.
   
 0.917
CU097_006823
ANK_REP_REGION domain-containing protein.
   
 0.897
CU097_015566
ANK_REP_REGION domain-containing protein.
   
 0.897
CU097_004445
S1 motif domain-containing protein.
   
 0.896
PPP4R2
Protein phosphatase 4, regulatory subunit 2.
    
 0.889
WDR82_1
WD repeat-containing protein 82.
    
 0.882
WDR82_2
WD repeat-containing protein 82.
    
 0.882
CU097_008783
Uncharacterized protein.
    
 0.880
CU097_013562
Fip1 domain-containing protein.
    
 0.874
CPSF1_1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.862
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.