STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_008306Protein YIP. (246 aa)    
Predicted Functional Partners:
CU097_015572
Protein YIP.
   
 
 0.766
GLC3_1
Alpha-1,4-glucan branching enzyme.
  
 0.703
GLC3_2
Alpha-1,4-glucan branching enzyme.
  
 0.703
CU097_002906
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.676
CU097_012163
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.676
AP4E1_2
AP-4 complex subunit epsilon-1.
     
 0.673
AP4E1_1
AP-4 complex subunit epsilon-1.
     
 0.673
AP1M1_2
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 
  0.672
VPS5_2
Vacuolar protein sorting-associated protein 5.
   
 
  0.666
VPS5_1
Vacuolar protein sorting-associated protein 5.
   
 
  0.666
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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