STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_008392Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
CU097_006525
Uncharacterized protein.
   
 0.972
CU097_005295
Uncharacterized protein.
   
 0.972
SGN1_1
Cytoplasmic RNA-binding protein.
   
 0.969
CU097_011058
Pinin_SDK_memA domain-containing protein.
   
 0.969
SGN1_2
Cytoplasmic RNA-binding protein.
   
 0.969
MAGO2
Protein mago nashi 2.
    
 0.940
FAL1
RNA helicase; Belongs to the DEAD box helicase family.
    
 0.923
CU097_008333
Uncharacterized protein.
    
 0.901
CU097_011319
Uncharacterized protein.
    
 0.901
RBM8A
RNA-binding protein 8A.
    
 0.856
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.