STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COP1_2Coatomer subunit alpha. (546 aa)    
Predicted Functional Partners:
UBI::CRP6
Ubiquitin-40S ribosomal protein S27a.
    
 0.938
CU097_005806
Ubiquitin-like domain-containing protein.
    
 0.909
CU097_008749
Ubiquitin-like domain-containing protein.
    
 0.909
RRN7
Pol I core factor CF.
    
  0.869
CU097_002363
Ubiquitin-like domain-containing protein.
    
  0.869
CU097_013643
Ubiquitin-like domain-containing protein.
    
  0.869
CU097_009680
Uncharacterized protein.
    
 0.858
MMS2
E2 ubiquitin-conjugating protein mms2.
    
 0.807
HHT1_2
Histone H3; Belongs to the histone H3 family.
    
 0.777
HHT1_4
Histone H3; Belongs to the histone H3 family.
    
 0.777
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.