STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_007430Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
RPD3_2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.925
RPD3_1
Histone deacetylase.
    
 0.925
HOS2_2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.925
RPD3_3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.925
HOS2_1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.925
HAT2_1
Histone acetyltransferase type B subunit 2.
    
 0.899
HAT2_2
Histone acetyltransferase type B subunit 2.
    
 0.899
RBBP7
Retinoblastoma binding protein.
    
 0.899
CAF1
CCR4-Not complex caf1 ribonuclease subunit Caf1.
    
 0.899
RBBP4
Histone-binding protein rbbp4.
    
 0.899
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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