STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_011123Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
CU097_002811
S1 motif domain-containing protein.
   
 0.943
CU097_007492
Uncharacterized protein.
   
 0.940
EXOSC4_2
Exosome complex component RRP41.
   
 0.935
RRP4
Exosome non-catalytic core subunit rrp4.
   
 0.935
EXOSC7
Exosome complex component RRP42.
   
 0.933
CU097_008896
Uncharacterized protein.
   
 0.913
CU097_014231
Uncharacterized protein.
   
 0.913
EXOSC3_2
Exosome component 3.
   
 0.906
EXOSC3_1
Exosome component 3.
   
 0.906
EXOSC5_1
Exosome component 5.
   
 0.903
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.