STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1_2Structural maintenance of chromosomes protein 1. (245 aa)    
Predicted Functional Partners:
MCD1
Sister chromatid cohesion protein 1.
   
 0.997
SMC3
Structural maintenance of chromosomes protein.
  
0.996
SCC2
Sister chromatid cohesion protein.
   
 0.993
CU097_000504
Uncharacterized protein.
   
 0.990
CU097_005619
SCD domain-containing protein.
   
 0.990
CDC5
Serine/threonine-protein kinase.
   
 0.990
CU097_006520
Uncharacterized protein.
   
 0.984
CU097_004568
Uncharacterized protein.
   
 0.984
RAD30_1
DNA-directed DNA polymerase eta rad30.
  
 0.981
RAD30_2
DNA-directed DNA polymerase eta rad30.
  
 0.981
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.