STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_004334WD_REPEATS_REGION domain-containing protein. (937 aa)    
Predicted Functional Partners:
WDR50
U3 small nucleolar RNA-associated protein 18.
   
 0.998
UTP15
SnoRNA-binding rRNA-processing protein.
   
0.997
HEATR1
HEAT repeat-containing protein 1.
   
 0.997
CU097_002051
U3 small nucleolar RNA-associated protein 22.
   
 0.996
BMS1
Glycoside hydrolase 2 (Mannanase, beta-galactosidase).
   
 
 0.993
CU097_001004
WD_REPEATS_REGION domain-containing protein.
   
0.992
CU097_012847
WD_REPEATS_REGION domain-containing protein.
   
0.992
UTP13_1
U3 small nucleolar RNA-associated protein 13.
  
0.992
UTP13_2
U3 small nucleolar RNA-associated protein 13.
  
0.992
RCL1
rRNA-processing endoribonuclease.
   
 
 0.991
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.