STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC1_2Vacuolar sorting protein VPS33/slp1; Belongs to the STXBP/unc-18/SEC1 family. (673 aa)    
Predicted Functional Partners:
CU097_015721
V-SNARE coiled-coil homology domain-containing protein.
    
 0.983
SEC9_1
Protein transport protein S9 plasma membrane t-SNARE.
   
 0.944
SEC9_2
Protein transport protein S9 plasma membrane t-SNARE.
   
 0.944
SSO2_3
Syntaxin.
   
 0.931
SSO2_5
Syntaxin.
   
 0.931
SSO2_4
Syntaxin.
   
 0.931
SSO2_6
Syntaxin.
   
 0.931
SSO2_1
Syntaxin; Belongs to the syntaxin family.
   
 0.913
SSO2_2
Syntaxin; Belongs to the syntaxin family.
   
 0.913
SEC6
SNARE-binding exocyst subunit S6.
    
 0.856
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.