STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_001691Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
CU097_000609
HAMP domain-containing protein.
 
      0.818
CU097_013628
HPt domain-containing protein.
   
 0.808
PDB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.677
CU097_007708
Transket_pyr domain-containing protein.
    
 0.677
PDX1
Pyridoxine biosynthesis protein.
    
 0.662
CU097_002546
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.662
CU097_009223
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.662
CU097_012736
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.662
LAT1
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.662
KGD2
2-oxoglutarate dehydrogenase complex E2 component.
    
 0.662
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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