STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOF1_1rRNA-processing protein sof1. (439 aa)    
Predicted Functional Partners:
CU097_011248
Uncharacterized protein.
   
 0.997
WDR50
U3 small nucleolar RNA-associated protein 18.
   
 0.997
UTP11L
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.996
UTP15
SnoRNA-binding rRNA-processing protein.
   
  0.996
CU097_008874
CBF domain-containing protein.
   
  0.996
CU097_002051
U3 small nucleolar RNA-associated protein 22.
   
  0.993
MIS3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.993
UTP4_1
U3 small nucleolar RNA-associated protein.
   
 0.992
CU097_008726
Uncharacterized protein.
   
 0.992
IMP3
Small subunit (SSU) processome component.
   
  0.992
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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