STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_004505Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
RER2
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.677
ERG20_1
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.616
ERG20_2
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.616
COQ1_3
Coq1 putative hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.613
COQ1_1
Coq1 putative hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.606
COQ1_2
Coq1 putative hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.606
BTS1_1
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.568
BTS1_2
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.568
BTS1_3
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.568
CU097_004993
Creatinase_N domain-containing protein.
   
 
  0.508
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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