STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_006081Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1452 aa)    
Predicted Functional Partners:
IGBP1
Immunoglobulin (CD79A) binding protein 1.
    
 0.768
UGA2
Succinate-semialdehyde dehydrogenase.
   
 
 0.611
COX15_2
Protein required for the hydroxylation of heme O to form heme A, cox15.
    
 0.578
COX15_1
Protein required for the hydroxylation of heme O to form heme A, cox15.
    
 0.578
GLC3_1
Alpha-1,4-glucan branching enzyme.
   
 
  0.563
GLC3_2
Alpha-1,4-glucan branching enzyme.
   
 
  0.563
CU097_007361
Uncharacterized protein.
    
 0.552
CU097_011642
Uncharacterized protein.
    
 0.552
CU097_011007
Uncharacterized protein.
    
 0.552
SEN2_2
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.552
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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