Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CU097_000008 | CU097_000672 | A0A367J0I7 | A0A367JDR9 | SNF2_N domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.991 |
CU097_000008 | CU097_013286 | A0A367J0I7 | A0A367JWL4 | SNF2_N domain-containing protein. | Uncharacterized protein. | 0.873 |
CU097_000008 | DDB1A_1 | A0A367J0I7 | A0A367JA90 | SNF2_N domain-containing protein. | DNA damage-binding protein 1a. | 0.931 |
CU097_000008 | DDB1A_2 | A0A367J0I7 | A0A367JQ13 | SNF2_N domain-containing protein. | DNA damage-binding protein 1a. | 0.931 |
CU097_000008 | DDB1A_3 | A0A367J0I7 | A0A367KET7 | SNF2_N domain-containing protein. | DNA damage-binding protein 1a. | 0.931 |
CU097_000008 | ROC1A | A0A367J0I7 | A0A367K2Y4 | SNF2_N domain-containing protein. | RING-box protein 1A. | 0.919 |
CU097_000008 | RPB5 | A0A367J0I7 | A0A367J8K0 | SNF2_N domain-containing protein. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.982 |
CU097_000008 | RPB9 | A0A367J0I7 | A0A367JC43 | SNF2_N domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.992 |
CU097_000008 | RPC10 | A0A367J0I7 | A0A367IX52 | SNF2_N domain-containing protein. | DNA-directed RNA polymerase core subunit rpc10. | 0.982 |
CU097_000672 | CU097_000008 | A0A367JDR9 | A0A367J0I7 | WD_REPEATS_REGION domain-containing protein. | SNF2_N domain-containing protein. | 0.991 |
CU097_000672 | CU097_002982 | A0A367JDR9 | A0A367J0H7 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.991 |
CU097_000672 | CU097_013286 | A0A367JDR9 | A0A367JWL4 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.982 |
CU097_000672 | DDB1A_1 | A0A367JDR9 | A0A367JA90 | WD_REPEATS_REGION domain-containing protein. | DNA damage-binding protein 1a. | 0.986 |
CU097_000672 | DDB1A_2 | A0A367JDR9 | A0A367JQ13 | WD_REPEATS_REGION domain-containing protein. | DNA damage-binding protein 1a. | 0.986 |
CU097_000672 | DDB1A_3 | A0A367JDR9 | A0A367KET7 | WD_REPEATS_REGION domain-containing protein. | DNA damage-binding protein 1a. | 0.986 |
CU097_000672 | ROC1A | A0A367JDR9 | A0A367K2Y4 | WD_REPEATS_REGION domain-containing protein. | RING-box protein 1A. | 0.990 |
CU097_000672 | RPB5 | A0A367JDR9 | A0A367J8K0 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.974 |
CU097_000672 | RPB9 | A0A367JDR9 | A0A367JC43 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.977 |
CU097_000672 | RPC10 | A0A367JDR9 | A0A367IX52 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase core subunit rpc10. | 0.974 |
CU097_002982 | CU097_000672 | A0A367J0H7 | A0A367JDR9 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.991 |
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