STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS10_1Putative tRNA pseudouridine synthase Pus10. (518 aa)    
Predicted Functional Partners:
CU097_008018
Uncharacterized protein.
    
   0.862
CU097_000887
TRUD domain-containing protein.
   
  
 0.506
CU097_005317
TRUD domain-containing protein.
   
  
 0.506
CBF5
Centromere/microtubule-binding protein cbf5.
   
  
 0.505
TRUB1
TruB pseudouridine (Psi) synthase 1.
   
  
 0.503
CU097_007538
TYW3 domain-containing protein.
   
  
 0.495
TRMT1
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.463
NHP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
      
 0.448
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.435
NOP10_1
snoRNP complex protein.
     
 0.411
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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