STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP1FG-nucleoporin nsp1. (490 aa)    
Predicted Functional Partners:
CU097_001768
Uncharacterized protein.
   
 0.999
CU097_012037
Uncharacterized protein.
   
0.995
CU097_014855
Nup54 domain-containing protein.
  
 0.994
CU097_004237
Nup54 domain-containing protein.
   
 0.993
CU097_000143
Uncharacterized protein.
   
 0.991
CU097_012862
Uncharacterized protein.
   
 0.991
CU097_001328
Peptidase S59 domain-containing protein.
   
 0.990
CU097_015096
Peptidase S59 domain-containing protein.
   
 0.990
CU097_007182
YCII domain-containing protein.
   
 0.983
CU097_008182
Nuclear pore protein.
   
 0.983
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.