Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTK1 | CU097_000421 | A0A367JZZ9 | A0A367IT13 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Cyclin_C domain-containing protein; Belongs to the cyclin family. | 0.937 |
CTK1 | CU097_005907 | A0A367JZZ9 | A0A367J336 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | CID domain-containing protein. | 0.957 |
CTK1 | CU097_006893 | A0A367JZZ9 | A0A367IYC7 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Cyclin N-terminal domain-containing protein. | 0.951 |
CTK1 | CU097_007560 | A0A367JZZ9 | A0A367JRD4 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Uncharacterized protein; Belongs to the cyclin family. | 0.951 |
CTK1 | CU097_009377 | A0A367JZZ9 | A0A367J5F5 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.937 |
CTK1 | CU097_015355 | A0A367JZZ9 | A0A367KBQ0 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Uncharacterized protein; Belongs to the cyclin family. | 0.951 |
CTK1 | FAM58A_1 | A0A367JZZ9 | A0A367J185 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Cyclin-protein fam58a. | 0.922 |
CTK1 | RPB1_1 | A0A367JZZ9 | A0A367J9R2 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.966 |
CTK1 | RPB1_2 | A0A367JZZ9 | A0A367JLW2 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.966 |
CTK1 | SPT5 | A0A367JZZ9 | A0A367K1H9 | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.977 |
CU097_000421 | CTK1 | A0A367IT13 | A0A367JZZ9 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | 0.937 |
CU097_000421 | CU097_005907 | A0A367IT13 | A0A367J336 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | CID domain-containing protein. | 0.811 |
CU097_000421 | CU097_009377 | A0A367IT13 | A0A367J5F5 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.696 |
CU097_000421 | RPB1_1 | A0A367IT13 | A0A367J9R2 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.877 |
CU097_000421 | RPB1_2 | A0A367IT13 | A0A367JLW2 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.877 |
CU097_000421 | SPT5 | A0A367IT13 | A0A367K1H9 | Cyclin_C domain-containing protein; Belongs to the cyclin family. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.844 |
CU097_005907 | CTK1 | A0A367J336 | A0A367JZZ9 | CID domain-containing protein. | Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. | 0.957 |
CU097_005907 | CU097_000421 | A0A367J336 | A0A367IT13 | CID domain-containing protein. | Cyclin_C domain-containing protein; Belongs to the cyclin family. | 0.811 |
CU097_005907 | CU097_006893 | A0A367J336 | A0A367IYC7 | CID domain-containing protein. | Cyclin N-terminal domain-containing protein. | 0.824 |
CU097_005907 | CU097_007560 | A0A367J336 | A0A367JRD4 | CID domain-containing protein. | Uncharacterized protein; Belongs to the cyclin family. | 0.824 |
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