CU097_010697 protein (Rhizopus azygosporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CU097_010697

Uncharacterized protein; Belongs to the OSBP family. (405 aa)

Predicted Functional Partners:

PIK1_1

0.703

PIK1_2

0.703

CU097_000351

0.656

CU097_002895

0.656

CU097_015795

0.638

CU097_015958

0.638

CU097_010239

0.633

CU097_009806

0.633

CU097_003929

0.621

CU097_015417

0.621

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU097_000351	CU097_010697	A0A367JAS0	A0A367K2I1	SSD domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.656
CU097_002895	CU097_010697	A0A367JGZ7	A0A367K2I1	SSD domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.656
CU097_003929	CU097_010697	A0A367J3R4	A0A367K2I1	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.621
CU097_003929	CU097_015795	A0A367J3R4	A0A367KFL1	Uncharacterized protein.	Uncharacterized protein.	0.602
CU097_003929	CU097_015958	A0A367J3R4	A0A367KIG0	Uncharacterized protein.	Uncharacterized protein.	0.602
CU097_009806	CU097_010697	A0A367JXF3	A0A367K2I1	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.633
CU097_010239	CU097_010697	A0A367JR73	A0A367K2I1	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.633
CU097_010697	CU097_000351	A0A367K2I1	A0A367JAS0	Uncharacterized protein; Belongs to the OSBP family.	SSD domain-containing protein.	0.656
CU097_010697	CU097_002895	A0A367K2I1	A0A367JGZ7	Uncharacterized protein; Belongs to the OSBP family.	SSD domain-containing protein.	0.656
CU097_010697	CU097_003929	A0A367K2I1	A0A367J3R4	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.621
CU097_010697	CU097_009806	A0A367K2I1	A0A367JXF3	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.633
CU097_010697	CU097_010239	A0A367K2I1	A0A367JR73	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.633
CU097_010697	CU097_015417	A0A367K2I1	A0A367KE45	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.621
CU097_010697	CU097_015795	A0A367K2I1	A0A367KFL1	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.638
CU097_010697	CU097_015958	A0A367K2I1	A0A367KIG0	Uncharacterized protein; Belongs to the OSBP family.	Uncharacterized protein.	0.638
CU097_010697	PIK1_1	A0A367K2I1	A0A367JS83	Uncharacterized protein; Belongs to the OSBP family.	Phosphatidylinositol 4-kinase pik1alpha (PI4-kinase)(PtdIns-4-kinase); Belongs to the PI3/PI4-kinase family.	0.703
CU097_010697	PIK1_2	A0A367K2I1	A0A367JU19	Uncharacterized protein; Belongs to the OSBP family.	Phosphatidylinositol 4-kinase pik1alpha (PI4-kinase)(PtdIns-4-kinase); Belongs to the PI3/PI4-kinase family.	0.703
CU097_015417	CU097_010697	A0A367KE45	A0A367K2I1	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.621
CU097_015417	CU097_015795	A0A367KE45	A0A367KFL1	Uncharacterized protein.	Uncharacterized protein.	0.602
CU097_015417	CU097_015958	A0A367KE45	A0A367KIG0	Uncharacterized protein.	Uncharacterized protein.	0.602