STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_007990Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
CU097_011024
Homeobox domain-containing protein.
    
 0.806
UBC9
E2 SUMO-conjugating protein ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.682
PDI1_2
Protein disulfide-isomerase.
    
   0.631
PDI1_4
Protein disulfide-isomerase.
    
   0.631
PDI1_3
Protein disulfide-isomerase.
    
   0.631
CU097_008322
HMG box domain-containing protein.
    
 0.626
CU097_007551
Uridine kinase; Belongs to the uridine kinase family.
    
 0.617
CU097_011146
Uncharacterized protein.
    
 0.617
CU097_012859
Uridine kinase; Belongs to the uridine kinase family.
    
 0.617
FUR1
UPRTase.
    
 0.617
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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