STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL39_254S ribosomal protein L39, mitochondrial. (393 aa)    
Predicted Functional Partners:
MRPL10_2
YmL10.
   
 
 0.786
CU097_002831
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.781
CU097_011779
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.780
CU097_009663
tRNA-binding domain-containing protein.
  
 
 0.752
CU097_002215
tRNA-binding domain-containing protein.
  
 
 0.752
CDC60
Cytosolic leucyl tRNA synthetase.
  
 
 0.736
CU097_004422
Uncharacterized protein.
   
 
 0.735
CU097_004728
Methyltransf_25 domain-containing protein.
   
 
 0.731
CU097_002862
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.730
CU097_012926
Uncharacterized protein.
  
 
 0.728
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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