STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH3_2Mismatch repair protein msh3; Component of the post-replicative DNA mismatch repair system (MMR). (869 aa)    
Predicted Functional Partners:
MSH2
MutS-like protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.994
MSH6_2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.980
MSH6_1
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.980
MSH1_1
DNA mismatch repair ATPase msh1.
  
0.959
MSH5_1
MutS protein msh5.
  
0.959
MSH1_2
DNA mismatch repair ATPase msh1; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.959
PMS2
Mismatch repair endonuclease pms2.
 
 0.948
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.940
CU097_011623
Vezatin domain-containing protein.
   
 0.940
MLH1_2
DNA mismatch repair protein.
 
 0.938
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.