STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL7_660S ribosomal protein L7. (253 aa)    
Predicted Functional Partners:
CU097_000007
Uncharacterized protein.
   
 
 0.994
CU097_015904
Uncharacterized protein.
   
 
 0.994
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.993
RPL32_1
60S ribosomal protein L32.
  
 0.993
RPP0
Ribosomal protein P0 (A0) (L10E).
  
 0.992
TEF3_2
Translational elongation factor EF-1 alpha.
   
   0.991
TEF3_3
Translational elongation factor EF-1 alpha.
   
   0.991
TEF3_4
Translational elongation factor EF-1 alpha.
   
   0.991
TEF3_1
Translational elongation factor EF-1 alpha.
   
   0.991
RPL34_1
60S ribosomal protein L34.
  
 0.990
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.