STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL84976.1PFAM: MatE; TIGRFAM: putative efflux protein, MATE family. (454 aa)    
Predicted Functional Partners:
AFL83496.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
   
 
 0.767
AFL84975.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain.
  
    0.716
AFL86285.1
Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
  
    0.676
AFL84977.1
acyl-CoA hydrolase; PFAM: Thioesterase superfamily.
  
    0.626
AFL85333.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.614
AFL86327.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.614
AFL84974.1
Transcriptional regulator; PFAM: AsnC family.
  
    0.529
AFL84971.1
Zn-dependent oligopeptidase; PFAM: Peptidase family M3.
 
     0.412
msrA
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.409
AFL84973.1
Hypothetical protein.
 
     0.401
Your Current Organism:
Belliella baltica
NCBI taxonomy Id: 866536
Other names: B. baltica DSM 15883, Belliella baltica BA134, Belliella baltica DSM 15883, Belliella baltica str. DSM 15883, Belliella baltica strain DSM 15883
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.