Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFL85715.1PFAM: von Willebrand factor type A domain. (321 aa)    
Predicted Functional Partners:
AFL86212.1
PFAM: Protein of unknown function DUF58.
 
  
 0.831
AFL83447.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.815
AFL83833.1
Hypothetical protein.
 
   
 0.727
AFL84097.1
Mg-chelatase subunit ChlI.
  
 
 0.727
AFL85714.1
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.526
AFL86214.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
 
   
0.454
Your Current Organism:
Belliella baltica
NCBI taxonomy Id: 866536
Other names: B. baltica DSM 15883, Belliella baltica BA134, Belliella baltica DSM 15883, Belliella baltica str. DSM 15883, Belliella baltica strain DSM 15883
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