STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR12017.1Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
AJR12024.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.
  
 0.982
AJR12264.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.
  
 0.938
rpiB
Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.923
araD
Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.910
AJR12430.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 
0.900
AJR12021.1
PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.832
AJR12022.1
PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.825
AJR12020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.813
AJR12018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.812
AJR12019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
Your Current Organism:
Mycoplasma dispar
NCBI taxonomy Id: 86660
Other names: ATCC 27140, DSM 19993, M. dispar, NCTC 10125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.