Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AJR12397.1Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
AJR12396.1
Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AJR12398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
  0.989
AJR12371.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.660
AJR12399.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
AJR12114.1
phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.520
AJR12168.1
S-adenosylmethionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AdoMet synthase family.
     
 0.441
AJR12115.1
phenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.416
Your Current Organism:
Mycoplasma dispar
NCBI taxonomy Id: 86660
Other names: ATCC 27140, DSM 19993, M. dispar, NCTC 10125
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