Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQX53184.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
AQX53185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.898
AQX53665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.655
AQX53244.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
AQX53175.1
ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.642
AQX53926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0302 family.
  
     0.608
AQX55940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
AQX53430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
AQX56270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
AQX56408.1
Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
Your Current Organism:
Bacillus flexus
NCBI taxonomy Id: 86664
Other names: ATCC 49095, B. flexus, Bacillus sp. Fu, Bacillus sp. OS46R, Bacillus sp. PRD 213, CCUG 28525, CIP 106928, HAMBI 2080, IFO 15715, JCM 12301, LMG 11155, LMG:11155, NBRC 15715, NRRL NRS-665
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