rpoN protein (Bacillus flexus) - STRING interaction network

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[Homology]

Score

rpoN

RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)

Predicted Functional Partners:

rpoA

0.874

rpoB

0.834

rpoC

0.833

rpoZ

0.822

AQX55844.1

0.814

AQX53248.1

0.794

AQX54202.1

0.794

AQX54830.1

0.794

AQX55998.1

0.794

AQX53811.1

0.784

Your Current Organism:

Bacillus flexus

NCBI taxonomy Id: 86664
Other names: ATCC 49095, B. flexus, Bacillus sp. Fu, Bacillus sp. OS46R, Bacillus sp. PRD 213, CCUG 28525, CIP 106928, HAMBI 2080, IFO 15715, JCM 12301, LMG 11155, LMG:11155, NBRC 15715, NRRL NRS-665

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQX53248.1	rpoN	BC359_02335	BC359_02480	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AQX53811.1	rpoN	BC359_05525	BC359_02480	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AQX54202.1	rpoN	BC359_07680	BC359_02480	RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AQX54830.1	rpoN	BC359_11300	BC359_02480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AQX55844.1	rpoN	BC359_17000	BC359_02480	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AQX55998.1	rpoN	BC359_17935	BC359_02480	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
rpoA	rpoB	BC359_00170	BC359_00345	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	BC359_00170	BC359_00340	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoN	BC359_00170	BC359_02480	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
rpoA	rpoZ	BC359_00170	BC359_06520	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.994
rpoB	rpoA	BC359_00345	BC359_00170	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	BC359_00345	BC359_00340	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoN	BC359_00345	BC359_02480	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
rpoB	rpoZ	BC359_00345	BC359_06520	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.989
rpoC	rpoA	BC359_00340	BC359_00170	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	BC359_00340	BC359_00345	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoN	BC359_00340	BC359_02480	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
rpoC	rpoZ	BC359_00340	BC359_06520	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.979
rpoN	AQX53248.1	BC359_02480	BC359_02335	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
rpoN	AQX53811.1	BC359_02480	BC359_05525	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784

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