Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
minDSeptum site-determining protein MinC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)    
Predicted Functional Partners:
mreD
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.872
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
    0.854
AQX53607.1
Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.706
AQX53611.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.672
AQX53612.1
Stage IV sporulation protein FB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.672
AQX53244.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
AQX53613.1
Ribonuclease G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.619
AQX53191.1
Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.570
AQX53615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.518
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
  
 0.508
Your Current Organism:
Bacillus flexus
NCBI taxonomy Id: 86664
Other names: ATCC 49095, B. flexus, Bacillus sp. Fu, Bacillus sp. OS46R, Bacillus sp. PRD 213, CCUG 28525, CIP 106928, HAMBI 2080, IFO 15715, JCM 12301, LMG 11155, LMG:11155, NBRC 15715, NRRL NRS-665
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