Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQX54323.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AQX56432.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.761
AQX54320.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.548
AQX54322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.497
AQX53123.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
AQX54319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.461
AQX54321.1
UDP-N-acetyl-D-mannosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.461
AQX53989.1
Calcium-translocating P-type ATPase, SERCA-type; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.456
AQX54318.1
DUF2642 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
AQX54440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.417
AQX54583.1
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
Your Current Organism:
Bacillus flexus
NCBI taxonomy Id: 86664
Other names: ATCC 49095, B. flexus, Bacillus sp. Fu, Bacillus sp. OS46R, Bacillus sp. PRD 213, CCUG 28525, CIP 106928, HAMBI 2080, IFO 15715, JCM 12301, LMG 11155, LMG:11155, NBRC 15715, NRRL NRS-665
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