| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQX53885.1 | AQX55776.1 | BC359_05945 | BC359_16640 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| AQX53885.1 | addA | BC359_05945 | BC359_17115 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase-exonuclease AddAB subunit AddA; ATP-dependent DNA helicase. | 0.416 |
| AQX53885.1 | dnaN | BC359_05945 | BC359_00980 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.798 |
| AQX53885.1 | mutL | BC359_05945 | BC359_07250 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.821 |
| AQX53885.1 | pcrA | BC359_05945 | BC359_19555 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.848 |
| AQX53885.1 | recA | BC359_05945 | BC359_07185 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.883 |
| AQX53885.1 | rpoB | BC359_05945 | BC359_00345 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.664 |
| AQX55776.1 | AQX53885.1 | BC359_16640 | BC359_05945 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| AQX55776.1 | BC359_11230 | BC359_16640 | BC359_11230 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | Shikimate kinase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| AQX55776.1 | addA | BC359_16640 | BC359_17115 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase-exonuclease AddAB subunit AddA; ATP-dependent DNA helicase. | 0.610 |
| AQX55776.1 | dnaN | BC359_16640 | BC359_00980 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.745 |
| AQX55776.1 | ligA | BC359_16640 | BC359_19550 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.653 |
| AQX55776.1 | mutL | BC359_16640 | BC359_07250 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.682 |
| AQX55776.1 | pcrA | BC359_16640 | BC359_19555 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| AQX55776.1 | recA | BC359_16640 | BC359_07185 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.752 |
| AQX55776.1 | rpoB | BC359_16640 | BC359_00345 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.654 |
| AQX55776.1 | uvrC | BC359_16640 | BC359_04095 | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.621 |
| BC359_11230 | AQX55776.1 | BC359_11230 | BC359_16640 | Shikimate kinase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| BC359_11230 | pcrA | BC359_11230 | BC359_19555 | Shikimate kinase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| BC359_11230 | rpoB | BC359_11230 | BC359_00345 | Shikimate kinase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.884 |