STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI97631.1Spore coat protein JC. (189 aa)    
Predicted Functional Partners:
SDI97643.1
Spore coat protein JB.
 
  
 0.989
SDI97671.1
Spore coat protein JA.
 
 
 0.978
SDI98049.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.699
SDI95164.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.642
SDI97208.1
Stage V sporulation protein AD.
  
     0.641
SDJ28135.1
Transcriptional regulator.
  
    0.599
SDI97190.1
Stage V sporulation protein AC.
  
    0.596
SDI96402.1
SpoIVB peptidase. Serine peptidase. MEROPS family S55.
  
    0.534
SDI97688.1
Predicted phosphohydrolase, MPP superfamily.
       0.530
SDI97226.1
Stage V sporulation protein AE.
  
     0.526
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.