STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ17435.1L-lactate dehydrogenase complex protein LldE. (240 aa)    
Predicted Functional Partners:
lutB
L-lactate dehydrogenase complex protein LldF; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.
 0.999
SDJ17476.1
L-lactate dehydrogenase complex protein LldG.
 
 0.997
SDJ35453.1
D-lactate dehydrogenase (cytochrome).
 
 0.955
SDJ42559.1
Glutamate synthase (NADH) large subunit.
    
 0.892
SDJ65540.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.883
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.849
SDJ35150.1
CoA-disulfide reductase.
  
 
 0.833
SDJ79003.1
Dihydroxyacetone kinase, phosphotransfer subunit.
    
  0.824
SDJ34269.1
Rhodanese-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
   
 0.814
SDJ17416.1
Transcriptional regulator, GntR family.
     
 0.749
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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