STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ25224.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (273 aa)    
Predicted Functional Partners:
SDJ25243.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.980
SDJ25265.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.966
SDJ42712.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 0.941
SDJ35367.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.928
SDJ26250.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.891
SDJ37397.1
Multiple sugar transport system permease protein.
 
  0.887
SDJ35817.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.882
SDJ25823.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.879
SDJ46551.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.868
SDJ57585.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.862
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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