STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ27097.1Hypothetical protein. (567 aa)    
Predicted Functional Partners:
SDJ49767.1
Cysteine-rich secretory protein family protein.
  
     0.774
SDJ55374.1
Hypothetical protein.
  
     0.710
SDJ09134.1
Transcriptional regulatory protein, C terminal.
  
     0.694
SDJ78963.1
Protein of unknown function.
  
     0.674
SDJ37240.1
Z1 domain-containing protein.
  
     0.664
SDJ55391.1
Carbohydrate binding domain-containing protein.
  
     0.649
SDJ61941.1
HAMP domain-containing protein.
  
     0.647
SDJ09151.1
Major Facilitator Superfamily protein.
  
     0.631
SDJ33794.1
Signal transduction histidine kinase.
  
     0.600
SDJ27768.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.535
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.