STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ50364.1Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (458 aa)    
Predicted Functional Partners:
SDJ42559.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SDJ46141.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.863
SDJ45409.1
Diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein.
  
 
 0.767
SDI96741.1
methylmalonyl-CoA epimerase.
  
 
 0.747
SDJ46078.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.681
SDJ42575.1
Glutamate synthase (NADH) small subunit.
  
 0.659
SDJ17974.1
NAD-dependent deacetylase.
    
 0.646
SDJ65493.1
Isocitrate dehydrogenase (NADP).
   
 0.646
SDJ23245.1
Homoserine dehydrogenase.
  
  
 0.634
SDJ65510.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.600
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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