STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ57495.1Protein of unknown function. (76 aa)    
Predicted Functional Partners:
SDJ57513.1
Protein of unknown function.
 
     0.921
SDJ57471.1
Protein of unknown function.
 
     0.829
SDJ57534.1
YvrJ protein family protein.
       0.636
SDJ57459.1
Protein of unknown function.
 
    
0.493
SDJ49803.1
Fe-S-cluster containining protein.
  
     0.469
SDJ01814.1
Hook-length control protein FliK.
  
     0.458
SDJ25418.1
Signal peptidase I Serine peptidase. MEROPS family S26B.
  
     0.455
SDI97643.1
Spore coat protein JB.
  
     0.434
SDJ43261.1
Gas vesicle protein.
  
     0.424
SDI97631.1
Spore coat protein JC.
  
     0.404
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.