STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ72530.1Tetrapyrrole methylase family protein / MazG family protein. (483 aa)    
Predicted Functional Partners:
SDJ34047.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor.
  
 
  0.888
SDJ80044.1
Transcriptional regulator, contains XRE-family HTH domain.
    
  0.885
ribBA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.883
SDJ72550.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
    0.883
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
  
  
  0.879
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.865
SDJ58046.1
GAF domain-containing protein.
  
 
  0.858
SDJ79505.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.831
SDJ36271.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.824
SDJ72513.1
Polysaccharide transporter, PST family.
  
    0.812
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.