STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ74716.1Immune inhibitor A peptidase M6. (698 aa)    
Predicted Functional Partners:
SDJ49912.1
Voltage-gated potassium channel.
  
     0.645
SDJ16514.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.627
SDJ16571.1
Protein of unknown function.
  
     0.513
SDJ68411.1
Inner membrane protein.
  
     0.501
SDJ18227.1
Purine catabolism regulatory protein.
  
     0.489
SDJ17377.1
Uncharacterized membrane protein YccC.
  
     0.483
SDJ70039.1
Hypothetical protein.
  
     0.463
SDJ62501.1
Hypothetical protein.
  
     0.452
SDJ11739.1
Uncharacterized membrane protein YfhO.
  
     0.451
SDJ65813.1
Putative membrane protein.
  
     0.444
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.