STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ77598.1Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (413 aa)    
Predicted Functional Partners:
SDJ77619.1
Aspartate ammonia-lyase.
  
  
 0.696
SDJ77582.1
Two-component system, sensor histidine kinase YcbA.
 
   
 0.613
SDJ77561.1
Two-component system, response regulator YcbB.
  
    0.571
SDJ62127.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.453
SDJ46749.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
  
  
 0.418
SDJ42559.1
Glutamate synthase (NADH) large subunit.
      
 0.414
SDJ81543.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
     
 0.413
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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