STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAL-glutaminase; Belongs to the glutaminase family. (315 aa)    
Predicted Functional Partners:
SDJ42559.1
Glutamate synthase (NADH) large subunit.
     
 0.916
SDJ00205.1
L-glutamine synthetase.
    
 0.878
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.874
SDJ42575.1
Glutamate synthase (NADH) small subunit.
     
 0.841
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.837
SDJ80132.1
Protein of unknown function.
       0.773
SDI97720.1
Glutamate dehydrogenase (NAD); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.735
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.640
SDJ78823.1
N-Dimethylarginine dimethylaminohydrolase.
  
  
  0.544
SDI97753.1
Asparaginase.
    
 0.516
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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