STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000759675_00440Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000759675_03236
Unannotated protein.
   
  0.673
GCA_000759675_03191
Unannotated protein.
   
 
  0.637
GCA_000759675_02516
Unannotated protein.
  
  
 0.624
GCA_000759675_05556
Unannotated protein.
   
 
 0.570
GCA_000759675_05241
Unannotated protein.
     
 0.564
GCA_000759675_03235
Unannotated protein.
   
 0.491
GCA_000759675_00593
Unannotated protein.
     
 0.490
GCA_000759675_00442
Unannotated protein.
    
  0.473
GCA_000759675_00441
Unannotated protein.
       0.412
Your Current Organism:
Bacillus niacini
NCBI taxonomy Id: 86668
Other names: B. niacini, CIP 104585, DSM 2923, IFO 15566, JCM 12306, LMG 16677, LMG:16677, NBRC 15566
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.