STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL44923.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. (156 aa)    
Predicted Functional Partners:
EFL44925.1
Hypothetical protein.
 
    0.829
EFL44934.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.790
EFL46350.1
Phosphate-selective porin O and P; Identified by match to protein family HMM PF07396.
  
     0.724
EFL44920.1
Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.
 
     0.719
EFL44921.1
Hypothetical protein; Identified by glimmer; putative.
       0.619
EFL44931.1
Hypothetical protein; Identified by glimmer; putative.
       0.607
EFL44935.1
Hypothetical protein.
       0.606
EFL46980.1
Hypothetical protein; Identified by glimmer; putative.
 
   
 0.604
EFL44924.1
Hypothetical protein.
 
     0.595
EFL44940.1
Hypothetical protein.
       0.594
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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