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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL46671.1Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (241 aa)    
Predicted Functional Partners:
EFL46665.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
    0.806
EFL46679.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
    0.782
EFL46677.1
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Identified by match to protein family HMM PF03279.
     
 0.780
EFL46674.1
Identified by match to protein family HMM PF04488.
  
  
 0.737
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 
  0.715
EFL45948.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.695
EFL45745.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
  
     0.689
EFL45594.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
     0.613
EFL46676.1
Hypothetical protein.
       0.608
EFL45799.1
Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
 
    0.602
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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