Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL44841.1 | EFL45412.1 | HMPREF9296_0680 | HMPREF9296_0463 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.590 |
| EFL44841.1 | EFL46718.1 | HMPREF9296_0680 | HMPREF9296_2629 | Hypothetical protein. | Hypothetical protein. | 0.425 |
| EFL45405.1 | EFL45412.1 | HMPREF9296_0464 | HMPREF9296_0463 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.685 |
| EFL45405.1 | EFL45415.1 | HMPREF9296_0464 | HMPREF9296_0462 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.745 |
| EFL45405.1 | EFL45419.1 | HMPREF9296_0464 | HMPREF9296_0465 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | 0.767 |
| EFL45405.1 | EFL45423.1 | HMPREF9296_0464 | HMPREF9296_0467 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Hypothetical protein. | 0.685 |
| EFL45405.1 | EFL45431.1 | HMPREF9296_0464 | HMPREF9296_0461 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Identified by match to protein family HMM PF00160. | 0.534 |
| EFL45405.1 | EFL45435.1 | HMPREF9296_0464 | HMPREF9296_0466 | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | Hypothetical protein. | 0.835 |
| EFL45412.1 | EFL44841.1 | HMPREF9296_0463 | HMPREF9296_0680 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.590 |
| EFL45412.1 | EFL45405.1 | HMPREF9296_0463 | HMPREF9296_0464 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | 0.685 |
| EFL45412.1 | EFL45415.1 | HMPREF9296_0463 | HMPREF9296_0462 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.946 |
| EFL45412.1 | EFL45419.1 | HMPREF9296_0463 | HMPREF9296_0465 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | 0.577 |
| EFL45412.1 | EFL45423.1 | HMPREF9296_0463 | HMPREF9296_0467 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.589 |
| EFL45412.1 | EFL45431.1 | HMPREF9296_0463 | HMPREF9296_0461 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Identified by match to protein family HMM PF00160. | 0.625 |
| EFL45412.1 | EFL45435.1 | HMPREF9296_0463 | HMPREF9296_0466 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.622 |
| EFL45412.1 | EFL45703.1 | HMPREF9296_0463 | HMPREF9296_1741 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Identified by match to protein family HMM TIGR01352. | 0.593 |
| EFL45412.1 | EFL46718.1 | HMPREF9296_0463 | HMPREF9296_2629 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.611 |
| EFL45412.1 | tonB_6 | HMPREF9296_0463 | HMPREF9296_2424 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | TonB-dependent receptor; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352. | 0.560 |
| EFL45415.1 | EFL45405.1 | HMPREF9296_0462 | HMPREF9296_0464 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Inositol-3-phosphate synthase; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. | 0.745 |
| EFL45415.1 | EFL45412.1 | HMPREF9296_0462 | HMPREF9296_0463 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.946 |
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